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Tree alignment
Results: 92

#	Item
21	MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods Koichiro Tamura,1,2 Daniel Peterson,2 Nicholas Peterson,2 Glen Stecher,2 Masatoshi Nei,3 and Add to Reading List Source URL: www.megasoftware.net Language: English - Date: 2016-01-11 15:52:39 Computational phylogenetics Phylogenetics Bioinformatics Sequence alignment Masatoshi Nei Multiple sequence alignment Substitution model Maximum parsimony Molecular clock Nucleic acid sequence Lineage Phylogenetic tree
22	1 Large-scale multiple sequence alignment and phylogeny estimation Tandy Warnow1,∗ 1 Department of Computer Science, University of Texas at Austin, Austin, Add to Reading List Source URL: tandy.cs.illinois.edu Language: English - Date: 2014-08-30 16:01:16 Computational phylogenetics Bioinformatics Phylogenetics Multiple sequence alignment Sequence alignment Protein methods Phylogenetic tree Structural alignment Maximum parsimony Homology Protein superfamily Clustal
23	A Sequence-based Tree Similarity Search Alsayed Algergawy and Friederike Klan Heinz Nixdorf Chair for Distributed Information Systems Friedrich Schiller University of Jena, Germany Add to Reading List Source URL: rcis2015.hua.gr Language: English - Date: 2015-05-18 11:58:39 Binary trees Knowledge representation Tree R-tree Node B-tree Tree alignment
24	Multiple Sequence Alignment with a Tree-Based Weighting System O. Gotoh Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:50:03 Computational phylogenetics Bioinformatics Multiple sequence alignment Sequence alignment Alignment
25	k -Group 3 Multiple Alignment Based on A Search H. Imai Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:50:08 Computational phylogenetics Bioinformatics Biology Mathematical and theoretical biology Multiple sequence alignment Sequence alignment Gap penalty Phylo Dynamic programming Tree alignment NeedlemanWunsch algorithm
26	MAPP.JAR - MULTIVARIATE ANALYSIS OF PROTEIN POLYMORPHISM Readme. Last updated onCopyright Eric Stone and Arend Sidow, 2005. OVERVIEW MAPP reads an alignment of protein sequences and a tree relating the sequen Add to Reading List Source URL: mendel.stanford.edu Language: English - Date: 2005-11-30 16:08:31
27	Molecular Phylogenetic Analysis using both DNA and Amino Acid Sequence Data and Its Parallelization Hideo Matsuda, Hiroshi Yamashita Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:49:53 Biology Computational phylogenetics Phylogenetics Bioinformatics Genetics Nucleic acids Molecular phylogenetics PHYLIP Sequence alignment Phylogenetic tree Lineage Nucleic acid sequence
28	Construction of Phylogenetic Trees from Amino Acid Sequences using a Genetic Algorithm Hideo Matsuda Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:50:08 Computational phylogenetics Phylogenetics Biology Bioinformatics Multiple sequence alignment Neighbor joining PHYLIP Maximum parsimony Sequence alignment Phylogenetic tree Substitution matrix UPGMA
29	Prediction of Beta-Sheet Structures Using Stochastic Tree Grammars Hiroshi Mamitsuka Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:49:49 Bioinformatics Biology Chemistry Applied mathematics Context-free grammar Stochastic context-free grammar Peptide sequence Protein structure prediction Amino acid Sequence alignment Nucleic acid sequence Protein secondary structure
30	Genome Informatics 14: 579–Statistical Significance of Tree Similarity Scores Kiyoko F. Aoki Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2003-12-11 04:13:41 Computational phylogenetics Bioinformatics Glycomics Carbohydrates Carbohydrate chemistry Sequence alignment Glycan Glycobiology Gap penalty KEGG SmithWaterman algorithm Tree alignment